This directory contains reciprocal-best netted chains for mm10-tupChi1. - mm10.tupChi1.rbest.net.gz: mm10-referenced recip.best net to tupChi1. - mm10.tupChi1.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from mm10 to tupChi1 through the recip.best net. - tupChi1.mm10.rbest.net.gz: tupChi1-referenced recip.best net. - tupChi1.mm10.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/*.mm10.tupChi1.net.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2017-03-10 00:08 - md5sum.txt 2017-03-09 17:49 244 mm10.tupChi1.rbest.chain.gz 2017-03-09 17:47 49M mm10.tupChi1.rbest.net.gz 2017-03-09 17:49 79M tupChi1.mm10.rbest.chain.gz 2017-03-09 17:47 49M tupChi1.mm10.rbest.net.gz 2017-03-09 17:45 99M