This directory contains reciprocal-best netted chains for mm10-hg38. - mm10.hg38.rbest.net.gz: mm10-referenced recip.best net to hg38. - mm10.hg38.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from mm10 to hg38 through the recip.best net. - hg38.mm10.rbest.net.gz: hg38-referenced recip.best net. - hg38.mm10.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/*.mm10.hg38.net.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2015-04-10 14:47 - hg38.mm10.rbest.chain.gz 2015-04-10 14:19 65M hg38.mm10.rbest.net.gz 2015-04-10 14:17 141M md5sum.txt 2015-04-10 14:21 232 mm10.hg38.rbest.chain.gz 2015-04-10 14:19 65M mm10.hg38.rbest.net.gz 2015-04-10 14:21 91M