This directory contains reciprocal-best netted chains for hg19-rn6.

 - hg19.rn6.rbest.net.gz: hg19-referenced recip.best net to rn6.
 - hg19.rn6.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from hg19 to rn6 through the recip.best net.

 - rn6.hg19.rbest.net.gz: rn6-referenced recip.best net.
 - rn6.hg19.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/*.hg19.rn6.net.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                    Last modified      Size  Description
      Parent Directory                             -   
      axtRBestNet/            2015-06-10 08:59    -   
      hg19.rn6.rbest.chain.gz 2015-06-08 17:19   64M  
      hg19.rn6.rbest.net.gz   2015-06-08 17:21  140M  
      md5sum.txt              2015-06-08 17:21  228   
      rn6.hg19.rbest.chain.gz 2015-06-08 17:19   64M  
      rn6.hg19.rbest.net.gz   2015-06-08 17:18   89M