This directory contains reciprocal-best netted chains for ce11-cb4.

 - ce11.cb4.rbest.net.gz: ce11-referenced recip.best net to cb4.
 - ce11.cb4.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from ce11 to cb4 through the recip.best net.

 - cb4.ce11.rbest.net.gz: cb4-referenced recip.best net.
 - cb4.ce11.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/*.ce11.cb4.net.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                    Last modified      Size  Description
      Parent Directory                             -   
      axtRBestNet/            2015-07-02 11:53    -   
      md5sum.txt              2015-07-02 11:51  228   
      ce11.cb4.rbest.chain.gz 2015-07-02 11:51  2.6M  
      cb4.ce11.rbest.chain.gz 2015-07-02 11:51  2.6M  
      ce11.cb4.rbest.net.gz   2015-07-02 11:51  4.6M  
      cb4.ce11.rbest.net.gz   2015-07-02 11:51  4.7M